PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_11459.1_g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family GeBP
Protein Properties Length: 115aa    MW: 13618.5 Da    PI: 7.6763
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_11459.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57330.41.1e-09421122697
                   DUF573  26 tgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                              t    ++  ++   f+k+s+ ++k+s ++l eKi  L k+f + +++  +g++p+++++ d++if+ls ++Wg
  Sme2.5_11459.1_g00002.1  42 TWNALQSSFNNQLIFIKNSLpDLKISIEDLEEKITALGKRFIDVREQ--HGDDPEMAQTIDREIFNLSIRLWG 112
                              444444466667778888884589**********************9..***********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.4E-719112IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
MPRRDMHRNH VDPTYDHEAL LEGFISSAKR KVRTISDYKC ITWNALQSSF NNQLIFIKNS  60
LPDLKISIED LEEKITALGK RFIDVREQHG DDPEMAQTID REIFNLSIRL WGRRY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM1DMN85e-28M1DMN8_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000914621e-27(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1722155